On the plus side, all traces of the nasty trojan seem to have been removed. On the :? side, so have a number of (at least what I thought were) harmless registry entries. File associations for certain extensions along with .lnk, .scf, and who knows what else. Now I can't be certain it was the SpSeHjFix program that removed all of these, but they were intact before I ran the program, and gone afterwards..
My question is just: is this normal? Nothing I saw in any of the other threads mentioned anything like this. Is there something else I should be worried about?
I found a lnk.reg, reinstalled some programs (which incidentally fixed a problem I was having with Adobe Reader) - all in all, fixing these things aren't that big a deal. I just don't know why it happened in the first place, and I'm not certain there weren't necessary registry entries that were removed that I don't know about.
Also if anyone can point me to how to replace the missing .scf entry, I'd appreciate it.

Thanks in advance,
-bn