In addition to my loading troubles, some of my files (mainly folders, occasionally the desktop folder) have reverted their images to the ordinary windows files. By this I am referring to the files with the image of a piece of paper and a window on top of it (I don't know the actual name of these files). They behave exactly as they would had their image remained the same, however I am curious as to what could have caused this oddity. I don't believe that I have any viruses, but I could easily be wrong.
Lastly, my Vista Aero theme file acts rather weird. By this I mean that it refuses to change the face of my windows, and also refuses to show an example of how my windows would look in the "Themes Window." I am not as worried about this problem as much as the others previously listed, as I can live without this theme. However, I wish to cover all the bases in case it may be possible that these problems are caused by the disappearance of my Aero theme. If it is of any value, all of my problems started around the same time that I downloaded and installed the files VistaGlazz and Project X (Vista Aero theme customization files). The folders hadn't changed until a few days after the installation of Project X, however I am unsure of when the loading problems originated. I am currently seeking help from the creators of VistaGlazz (CodeGazer) on their forums (due to the corruption of my msstyle file), but no problems seem to exist with other Project X users.
P.S. If it helps: I am running on an HP Pavilion dv6000 Notebook and Vista Home Premium.